Soybean Functional Network

        A database of Soybean Functional Gene Network (SoyFGN) and miRNA Functional Network (SoymiRFN)


                         Functional Gene Network (FGN) | miRNA Network (miRFN)
                                          miRNA-Target datasets | 3'-UTR | Gene Annotations| KEGG Pathway
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Publications

Publications

Please use the following citation formats when referring to resources available from the Soybean Functional Network(SoyFN) Website in your publications.

1. Yungang Xu, Maozu Guo*, Wenli Shi, Xiaoyan Liu, Chunyu Wang. A novel insight into Gene Ontology semantic similarity. Genomics (2013) 101(6): 368-375. DOI: 10.1016/j.ygeno.2013.04.010 (Full Text )

2. Yungang Xu*, Maozu Guo*, Xiaoyan Liu, Chunyu Wang. System-level insights into the cellular interactome of a non-model organism: inferring, modelling and analysing the functional gene network of Glycine max. PLoS ONE (2014) 9(11): e113907. DOI:10.1371/journal.pone.0113907

3. Yungang Xu*, Maozu Guo*, Xiaoyan Liu, Chunyu Wang, Yang Liu. Inferring the Soybean (Glycine max) microRNA functional network based on target gene network. Bioinformatics 30 (1):94-103. (DOI: 10.1093/bioinformatics/btt605) (Full Text )

4. Yungang Xu*, Maozu Guo*, Xiaoyan Liu, Chunyu Wang, Yang Liu. SoyFN: a knowledge database of soybean functional networks.Database-Oxford (2014) 2014: bau019. (DOI: 10.1093/database/bau019) (Full Text)

5. Yungang Xu*, Maozu Guo*, Xiaoyan Liu, Chunyu Wang, Yang Liu, Guojun Liu. Identify bilayer modules via Pseudo-3D Clustering Algorithm.Under review

* The corresponding authors.
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